Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCGACTGCAGGACTTGGCCACTCAGCTGCAGG
((((((((((((((((..(((&))).)))))))))...............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207034
GeneSymbolRNF40
Binding site1529,1565
Score1.0
Seed1
Au0.426
Energy-23.5
Binding len36
Me-3.938
Phylopstem2.9528757096774196
Phylopflank2.6059237312499994
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure