Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCATCAACTGTGGCTGGAAG
((.((((((((((((...(((&)))...)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207044
GeneSymbolCLASP2
Binding site1145,1167
Score0.923
Seed0
Au0.515
Energy-20.1
Binding len22
Me-5.728
Phylopstem0.7502840333333333
Phylopflank1.43282648375
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure