Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCCAAGGTGCT
..(((.((..(((((((((((&))))))))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207048
GeneSymbolBACE1
Binding site2270,2289
Score0.923
Seed0
Au0.515
Energy-21.8
Binding len19
Me-9.157
Phylopstem0.6485337454545455
Phylopflank0.8632876387499999
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure