Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTCAACCCGCTGCT
..(((((.(.(((((..((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207048
GeneSymbolBACE1
Binding site2837,2856
Score1.0
Seed0
Au0.441
Energy-19.9
Binding len19
Me-8.746
Phylopstem1.0926312
Phylopflank1.02872623625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure