Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTCAACCCGCTGCT
..(((((.(.(((((..((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207049
GeneSymbolBACE1
Binding site2762,2781
Score1.0
Seed0
Au0.441
Energy-19.9
Binding len19
Me-8.746
Phylopstem1.1039906
Phylopflank0.4997469524999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure