Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCAGCTGCC
..((((((..(((((..((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207049
GeneSymbolBACE1
Binding site2859,2875
Score0.846
Seed1
Au0.485
Energy-19.1
Binding len16
Me-7.489
Phylopstem0.9222191666666667
Phylopflank0.7525212750000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure