Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCCTTGGAAGCTGGGAG
((.(((((..(((((((((((&))))))))))).....))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207071
GeneSymbolFAM181A
Binding site1236,1261
Score0.846
Seed0
Au0.338
Energy-25.3
Binding len25
Me-7.794
Phylopstem-0.3706412727272726
Phylopflank-0.21823912500000003
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure