Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTGCAGCTGTTATCAATATCAAGATGGCTGTAT
.(((((((((((((((((((.&))))))))))))...............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001211
GeneSymbolBUB1B
Binding site2615,2650
Score0.846
Seed1
Au0.662
Energy-19.8
Binding len35
Me-3.793
Phylopstem2.287793035294118
Phylopflank2.3436937587499997
Longest consecutive pairings12
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure