Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGCGGCCTCGCGGACCCTGCGCCTGTGGCTGTGGCTGCGGC
(((((((((((((((..((((&.)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001212
GeneSymbolC1QBP
Binding site251,298
Score0.923
Seed1
Au0.309
Energy-24.4
Binding len22
Me-4.171
Phylopstem4.126992146666668
Phylopflank3.0312953850000004
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure