Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCCAGAAGTGCCTGTCCGCTGCAGCCGCAC
.(((.((((((((.(..((((&.))))..).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001215
GeneSymbolCA6
Binding site990,1025
Score0.923
Seed0
Au0.426
Energy-24.4
Binding len22
Me-9.002
Phylopstem-0.71371137
Phylopflank-0.57805613025
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure