Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAGTACCGGGCTCTGCAGCTGCATCTGCACTGGGGGGCTGCAGGTCGTCC
.((((((((((((.(((((..&.))))))))))))))..))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001216
GeneSymbolCA9
Binding site685,736
Score0.923
Seed1
Au0.324
Energy-29.2
Binding len21
Me-4.65
Phylopstem2.280057428571429
Phylopflank1.4409768939999998
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure