Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGCGGGAGTACCGGGCTCTGCAGCTGCAT
.(((((((((((..((..(((&.)))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001216
GeneSymbolCA9
Binding site678,710
Score1.0
Seed1
Au0.265
Energy-25.4
Binding len21
Me-5.939
Phylopstem2.2829664545454547
Phylopflank1.5075761515000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure