Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGCAGCTGCACCTGCAC
.(((((.(((((((((..(((&)))..))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001218
GeneSymbolCA12
Binding site468,489
Score0.923
Seed0
Au0.338
Energy-24.6
Binding len21
Me-5.337
Phylopstem-0.04228271111111112
Phylopflank-0.5278835949999999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure