Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGGCATGTGTGGCTGCAGG
(((((((((((..(((.((((&))))...)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001218
GeneSymbolCA12
Binding site4128,4152
Score1.0
Seed1
Au0.426
Energy-21.9
Binding len24
Me-8.574
Phylopstem0.10559944545454546
Phylopflank-0.41755976000000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure