Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCGCCGCCGAGCTGCAC
.(((((((.((((.((.((((&)))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001218
GeneSymbolCA12
Binding site541,561
Score0.981
Seed1
Au0.456
Energy-21.9
Binding len20
Me-5.707
Phylopstem-0.7300425428571428
Phylopflank-0.24986386249999992
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure