Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAAGCCGGAGACTGCGGT
((((((((.(((((...(((.&)))..))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001220473
GeneSymbolPPFIA2
Binding site187,208
Score1.0
Seed1
Au0.471
Energy-20.5
Binding len21
Me-5.962
Phylopstem-0.024693255555555564
Phylopflank0.7777400250000001
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure