Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTCCAGCA
.....((((.(((((((((((&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001220478
GeneSymbolPPFIA2
Binding site3007,3024
Score0.846
Seed0
Au0.574
Energy-20.0
Binding len17
Me-14.908
Phylopstem5.889044727272727
Phylopflank4.70215822
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure