Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCTGAGTTGCGGT
((((((((.((((((..((((&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001220480
GeneSymbolPPFIA2
Binding site528,547
Score0.821
Seed1
Au0.471
Energy-19.7
Binding len19
Me-5.227
Phylopstem4.8177125
Phylopflank2.9586103887500004
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure