Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGGTCTTCTTCAGCTCACAGTACCGTCTACACCGCAAGAGCCAATATTTGAAAATGGCTGCTGCAAA
((((((((((((.((((.(((&.)))...))))))))).......................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001220484
GeneSymbolHEATR4
Binding site485,557
Score0.923
Seed1
Au0.5
Energy-21.3
Binding len47
Me-5.227
Phylopstem0.4849172114285715
Phylopflank1.1083203325
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure