Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTTCAACCATGCAGGTGCT
..(((.((((((((((.((((&))))))))))........)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001220488
GeneSymbolCDH13
Binding site253,280
Score0.846
Seed0
Au0.456
Energy-20.5
Binding len27
Me-6.858
Phylopstem-0.21372752222222222
Phylopflank1.3736596074999996
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure