Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGCGTGCAT
.((((..((((((((((....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001220492
GeneSymbolCDH13
Binding site72,87
Score0.846
Seed0
Au0.412
Energy-19.5
Binding len15
Me-7.238
Phylopstem3.9261539999999995
Phylopflank4.0647890875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure