Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTGCCTGGTGGCTGCAGA
(((((((((((((.(.(((((&)))))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362896
GeneSymbolPUF60
Binding site321,344
Score0.846
Seed1
Au0.353
Energy-23.0
Binding len23
Me-5.027
Phylopstem0.77942218
Phylopflank0.6852740262499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure