Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTATGACACCATCTTCCAGATATTCAACAACCGCAACTGCC
..((((.(((((((((.....&.))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001225
GeneSymbolCASP4
Binding site735,779
Score1.0
Seed0
Au0.529
Energy-22.2
Binding len16
Me-6.501
Phylopstem2.782576555555556
Phylopflank0.9417812500000002
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure