Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAATGCTAACTAAAAAGCTGCAT
.(((((((..(((((((((((&))))...))).))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001226
GeneSymbolCASP6
Binding site884,911
Score0.846
Seed1
Au0.691
Energy-18.0
Binding len27
Me-6.092
Phylopstem4.66589762
Phylopflank3.9393673325000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure