Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATGTGGGGCCAGGTC
(((((((.(((.((((......&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001229
GeneSymbolCASP9
Binding site1583,1600
Score0.923
Seed1
Au0.456
Energy-17.1
Binding len17
Me-9.598
Phylopstem4.123191285714285
Phylopflank2.26773108375
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end2
Position3UTR
2D Structure