Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTTGCTGAAGCACCCCCGGACTGCAGTGTGAACGTGCTGTGCAAT
(((((((((((((((((((((&))))))).................)))))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001229
GeneSymbolCASP9
Binding site2304,2355
Score0.923
Seed1
Au0.397
Energy-21.3
Binding len51
Me-3.938
Phylopstem2.2904426330000005
Phylopflank1.101982409375
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure