Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACATCAAATTCTTTGCCACCTTTGACAAAGGGGTTGCAAA
((((((((.((((((((((((&))))))))...........)))............).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001232
GeneSymbolCASQ2
Binding site742,787
Score0.885
Seed1
Au0.632
Energy-19.9
Binding len45
Me-4.994
Phylopstem-0.06820354
Phylopflank0.07099904375
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure