Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGCTGCAGCGGCCGCGCACCAAGGCTGCGATGGGGCTG
((.(((((((((((((((...&)))..................))))))))...)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001233
GeneSymbolCAV2
Binding site14,53
Score0.846
Seed0
Au0.309
Energy-22.4
Binding len39
Me-5.495
Phylopstem0.7804102722222221
Phylopflank0.6817225049999995
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure