Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGCCAGCCGGGCTGCAGC
((((((((.((((((...(((&)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001233
GeneSymbolCAV2
Binding site2,24
Score0.846
Seed1
Au0.208
Energy-23.6
Binding len22
Me-5.227
Phylopstem-0.12745007500000005
Phylopflank0.6880445825
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure