Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGACCGGCGGCTACGAC
(((.(((((((((((((....&)))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001237
GeneSymbolCCNA2
Binding site140,159
Score1.0
Seed0
Au0.324
Energy-20.4
Binding len19
Me-6.97
Phylopstem0.27644457142857143
Phylopflank0.010146192000000002
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
Position5UTR
2D Structure