Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACATGAAGTGCTACTGCCGCAGTATCCCCAGCAAATCTTTATACAGATTGCAGA
(((((((((((((((((((..&))))))............)))))))).........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001238
GeneSymbolCCNE1
Binding site968,1025
Score0.846
Seed1
Au0.515
Energy-19.6
Binding len57
Me-3.938
Phylopstem3.2442904269642847
Phylopflank4.702284773875
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure