Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCCAGCTGTAAA
(((((((((.((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001240
GeneSymbolCCNT1
Binding site1909,1925
Score1.0
Seed1
Au0.529
Energy-22.8
Binding len16
Me-5.18
Phylopstem0.14338695555555558
Phylopflank0.5711887425
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure