Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCAAGCGTTGGCTGTC
..(((((((((.((((..(((&)))..)))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001240
GeneSymbolCCNT1
Binding site1018,1039
Score0.846
Seed1
Au0.485
Energy-19.8
Binding len21
Me-8.304
Phylopstem0.65438078
Phylopflank0.6051777912499999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure