Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGTGGCGCT
..((.(((((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242307
GeneSymbolPITRM1
Binding site3127,3141
Score0.923
Seed0
Au0.397
Energy-20.4
Binding len14
Me-9.076
Phylopstem4.050622090909091
Phylopflank4.46196511375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure