Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCTCAACCGTAGATGCT
..(((.(((((((((.((((.&))))..))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242307
GeneSymbolPITRM1
Binding site2888,2908
Score0.923
Seed0
Au0.515
Energy-20.3
Binding len20
Me-7.091
Phylopstem4.146657
Phylopflank4.435154275
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure