Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCGGGATGGATCAGGTGCGGCTGA
...((((((((((((.(((((&))))))))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242307
GeneSymbolPITRM1
Binding site2227,2258
Score1.0
Seed0
Au0.485
Energy-19.2
Binding len31
Me-6.748
Phylopstem4.0244244176
Phylopflank2.84507466975
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure