Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCTGCAGACTGCT
..((((((((((((((..(((&))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242317
GeneSymbolMAP3K13
Binding site1638,1657
Score0.923
Seed1
Au0.412
Energy-21.5
Binding len19
Me-4.957
Phylopstem4.107319533333333
Phylopflank2.8252691687500002
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure