Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTGAGAGTCAGGTA
(((((((...((((((((....&))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242335
GeneSymbolLHX6
Binding site1274,1293
Score0.846
Seed1
Au0.353
Energy-20.7
Binding len19
Me-8.55
Phylopstem0.4454118425
Phylopflank0.19022319024999995
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure