Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTACTGAGTGGAGTGTGCCAGA
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242340
GeneSymbolCATSPERE
Binding site248,272
Score1.0
Seed1
Au0.632
Energy-16.5
Binding len11
Me-11.418
Phylopstem0.8985215555555555
Phylopflank0.648348217
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure