Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAACATGCAGCTGTAC
.(((((((((((((.(.....&).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242361
GeneSymbolNRDC
Binding site1629,1646
Score0.923
Seed1
Au0.544
Energy-18.5
Binding len17
Me-4.529
Phylopstem3.3335982142857143
Phylopflank3.9933073399999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure