Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTAGCGCCTGTGCTTTCTCTCAGGCTCCGTGTGCCAGGG
.((((((((((...((.((...&.))..))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242362
GeneSymbolMAGED4B
Binding site810,850
Score0.923
Seed1
Au0.324
Energy-20.3
Binding len21
Me-9.286
Phylopstem-0.18239549000000002
Phylopflank0.31637563874999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure