Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAGGGTGCAGCTGCT
..(((((((((.((....(((&)))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242362
GeneSymbolMAGED4B
Binding site1160,1179
Score0.846
Seed1
Au0.338
Energy-22.2
Binding len19
Me-9.272
Phylopstem0.5518271111111112
Phylopflank0.83677027625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure