Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGCAGCGCGGA
((((.(((((((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242366
GeneSymbolSLC46A1
Binding site297,313
Score1.0
Seed0
Au0.324
Energy-24.7
Binding len16
Me-8.057
Phylopstem-0.3064525454545455
Phylopflank0.16285985
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure