Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGCCTGCAGGGGCGATGCGATCTCCTATGCCAGGA
.((((((((((..(((((....&.)))))..)..............))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242369
GeneSymbolCACFD1
Binding site630,668
Score0.923
Seed1
Au0.382
Energy-19.3
Binding len33
Me-8.429
Phylopstem1.531643875
Phylopflank1.6488436474999992
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure