Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAAGTCTGCAGCTGTG
..((((((((((((((..((.&))..))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242369
GeneSymbolCACFD1
Binding site2629,2650
Score0.846
Seed1
Au0.353
Energy-21.9
Binding len21
Me-4.957
Phylopstem-0.5490441250000001
Phylopflank-0.9056233087499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure