Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAGCTGCGGCTGCGGC
((((((((((((((.(.....&).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242376
GeneSymbolGFAP
Binding site376,393
Score1.0
Seed1
Au0.324
Energy-23.2
Binding len17
Me-4.673
Phylopstem0.04704077857142859
Phylopflank-0.12013298749999993
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure