Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTGACACTTTAATGTTGTATGCTTGGTG
(((.((((((((((((......&.)))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242409
GeneSymbolGAREM1
Binding site3582,3613
Score0.846
Seed0
Au0.632
Energy-18.7
Binding len18
Me-6.97
Phylopstem0.6775334166666666
Phylopflank0.32876237875000003
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end2
Position3UTR
2D Structure