Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGCGGCCGCCGCAGCTGCAGA
(((((((((((((.((.....&.)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242409
GeneSymbolGAREM1
Binding site100,124
Score1.0
Seed1
Au0.221
Energy-27.6
Binding len18
Me-4.794
Phylopstem1.1236729015384617
Phylopflank0.9381737302499997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure