Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTTGACTGCAGCA
.....((((((((((...(((&)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242413
GeneSymbolPRKCQ
Binding site1881,1898
Score0.923
Seed0
Au0.574
Energy-18.0
Binding len17
Me-13.899
Phylopstem1.4333211
Phylopflank2.36764641875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure