Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCGGACTGATGTGGAGATGTGACAGCCCCGATGAGCACCTGGCTGGCTGCAGGGTCC
.((((((((((((...(((..&.)))..)))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001242452
GeneSymbolIRF5
Binding site1414,1474
Score0.846
Seed1
Au0.397
Energy-29.9
Binding len19
Me-5.619
Phylopstem-0.13166158333333333
Phylopflank-0.31002922249999987
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure